TY - JOUR
T1 - Development of QSAR models for predicting hepatocarcinogenic toxicity of chemicals
AU - Massarelli, Ilaria
AU - Imbriani, Marcello
AU - Coi, Alessio
AU - Saraceno, Marilena
AU - Carli, Niccolò
AU - Bianucci, Anna Maria
PY - 2009/9
Y1 - 2009/9
N2 - A dataset comprising 55 chemicals with hepatocarcinogenic potency indices was collected from the Carcinogenic Potency Database with the aim of developing QSAR models enabling prediction of the above unwanted property for New Chemical Entities. The dataset was rationally split into training and test sets by means of a sphere-exclusion type algorithm. Among the many algorithms explored to search regression models, only a Support Vector Machine (SVM) method led to a QSAR model, which was proved to pass rigorous validation criteria, in accordance with the OECD guidelines. The proposed model is capable to explain the hepatocarcinogenic toxicity and could be exploited for predicting this property for chemicals at the early stage of their development, so optimizing resources and reducing animal testing.
AB - A dataset comprising 55 chemicals with hepatocarcinogenic potency indices was collected from the Carcinogenic Potency Database with the aim of developing QSAR models enabling prediction of the above unwanted property for New Chemical Entities. The dataset was rationally split into training and test sets by means of a sphere-exclusion type algorithm. Among the many algorithms explored to search regression models, only a Support Vector Machine (SVM) method led to a QSAR model, which was proved to pass rigorous validation criteria, in accordance with the OECD guidelines. The proposed model is capable to explain the hepatocarcinogenic toxicity and could be exploited for predicting this property for chemicals at the early stage of their development, so optimizing resources and reducing animal testing.
KW - Carcinogenic potency database
KW - Hepatocarcinogenic
KW - Quantitative structure-activity relationship
KW - Sphere-exclusion
KW - WEKA
UR - http://www.scopus.com/inward/record.url?scp=67650456828&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=67650456828&partnerID=8YFLogxK
U2 - 10.1016/j.ejmech.2009.02.014
DO - 10.1016/j.ejmech.2009.02.014
M3 - Article
C2 - 19272677
AN - SCOPUS:67650456828
SN - 0223-5234
VL - 44
SP - 3658
EP - 3664
JO - European Journal of Medicinal Chemistry
JF - European Journal of Medicinal Chemistry
IS - 9
ER -